van Wijk, Klaas: search on Z-Library

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1

Central Functions of the Lumenal and Peripheral Thylakoid Proteome of Arabidopsis Determined by Experimentation and Genome-Wide Prediction

Jean-Benoît Peltier, Olof Emanuelsson, Dário E. Kalume, Jimmy Ytterberg, Giulia Friso, Andrea Rudella, David A. Liberles, Linda Söderberg, Peter Roepstorff, Gunnar von Heijne and Klaas J. van Wijk

Journal:

Year:

2002

Language:

english

File:

PDF, 4.67 MB

english, 2002

2

The Functional Network of the Arabidopsis Plastoglobule Proteome Based on Quantitative Proteomics and Genome-Wide Coexpression Analysis

Peter K. Lundquist, Anton Poliakov, Nazmul H. Bhuiyan, Boris Zybailov, Qi Sun and Klaas J. van Wijk

Journal:

PLANT PHYSIOLOGY

Year:

2012

Language:

english

File:

PDF, 4.28 MB

english, 2012

3

Plastoglobuli: Plastid Microcompartments with Integrated Functions in Metabolism, Plastid Developmental Transitions, and Environmental Adaptation

van Wijk, Klaas J., Kessler, Felix

Journal:

Annual Review of Plant Biology

Year:

2017

Language:

english

File:

PDF, 4.34 MB

english, 2017

4

In vivo trapping of proteins interacting with the chloroplast CLPC1 chaperone; potential substrates and adaptors

Montandon, Cyrille, Friso, Giulia, Liao, Jui-Yun Rei, Choi, Junsik, van Wijk, Klaas J.

Journal:

Journal of Proteome Research

Year:

2019

Language:

english

File:

PDF, 2.05 MB

english, 2019

5

ABC1K atypical kinases in plants: filling the organellar kinase void

Peter K. Lundquist, Jerrold I. Davis, Klaas J. van Wijk

Journal:

Trends in Plant Science

Year:

2012

Language:

english

File:

PDF, 1.23 MB

english, 2012

6

Cell-type-specific differentiation of chloroplasts in C4 plants

Wojciech Majeran, Klaas J. van Wijk

Journal:

Trends in Plant Science

Year:

2009

Language:

english

File:

PDF, 854 KB

english, 2009

7

Host Defense Skin Peptides Vary with Color Pattern in the Highly Polymorphic Red-Eyed Treefrog

Davis, Leyla R., Klonoski, Karina, Rutschow, Heidi L., Van Wijk, Klaas J., Sun, Qi, Haribal, Meena M., Saporito, Ralph A., Vega, Andres, Rosenblum, Erica B., Zamudio, Kelly R., Robertson, Jeanne M.

Journal:

Frontiers in Ecology and Evolution

Year:

2016

Language:

english

File:

PDF, 2.01 MB

english, 2016

8

Protein Maturation and Proteolysis in Plant Plastids, Mitochondria, and Peroxisomes

van Wijk, Klaas J.

Journal:

Annual Review of Plant Biology

Year:

2015

Language:

english

File:

PDF, 1.19 MB

english, 2015

9

Analyses of the secretomes of Erwinia amylovora and selected hrp mutants reveal novel type III secreted proteins and an effect of HrpJ on extracellular harpin levels

RIITTA M. NISSINEN, A. JIMMY YTTERBERG, ADAM J. BOGDANOVE, KLAAS J. VAN WIJK, STEVEN V. BEER

Journal:

Molecular Plant Pathology

Year:

2007

Language:

english

File:

PDF, 251 KB

english, 2007

10

Developmental and Subcellular Organization of Single-Cell C 4 Photosynthesis in Bienertia sinuspersici Determined by Large-Scale Proteomics and cDNA Assembly from 454 DNA Sequencing

Offermann, Sascha, Friso, Giulia, Doroshenk, Kelly A., Sun, Qi, Sharpe, Richard M., Okita, Thomas W., Wimmer, Diana, Edwards, Gerald E., van Wijk, Klaas J.

Journal:

Journal of Proteome Research

Year:

2015

Language:

english

File:

PDF, 2.45 MB

english, 2015

11

Evidence for SecA- and ΔpH-independent insertion of D1 into thylakoids

Klaas Jan van Wijk, Tracy G. Knott, Colin Robinson

Journal:

Year:

1995

Language:

english

File:

PDF, 380 KB

english, 1995

12

Construction of Plastid Reference Proteomes for Maize and Arabidopsis and Evaluation of Their Orthologous Relationships; The Concept of Orthoproteomics

Huang, Mingshu, Friso, Giulia, Nishimura, Kenji, Qu, Xian, Olinares, Paul Dominic B., Majeran, Wojciech, Sun, Qi, van Wijk, Klaas J.

Journal:

Journal of Proteome Research

Year:

2013

Language:

english

File:

PDF, 1.99 MB

english, 2013

13

Phosphorylation of plastoglobular proteins in Arabidopsis thaliana

Lohscheider, Jens N., Friso, Giulia, van Wijk, Klaas J.

Journal:

Journal of Experimental Botany

Year:

2016

Language:

english

File:

PDF, 727 KB

english, 2016

14

The Multinational Arabidopsis Steering Subcommittee for Proteomics Assembles the Largest Proteome Database Resource for Plant Systems Biology

Weckwerth, Wolfram, Baginsky, Sacha, van Wijk, Klaas, Heazlewood, Joshua L., Millar, Harvey

Journal:

Journal of Proteome Research

Year:

2008

Language:

english

File:

PDF, 116 KB

english, 2008

15

Modified C1p Protease Complex in the C1pP3 Null Mutant and Consequences for Chloroplast Development and Function in Arabidopsis

Jitae Kim, Paul Dominic Olinares, Soo-hyun Oh, Stefania Ghisaura, Anton Poliakov, Lalit Ponnala and Klaas J. van Wijk

Journal:

PLANT PHYSIOLOGY

Year:

2013

Language:

english

File:

PDF, 4.24 MB

english, 2013

16

A scalable, GFP-based pipeline for membrane protein overexpression screening and purification

David Drew, Dirk-Jan Slotboom, Giulia Friso, Torsten Reda, Pierre Genevaux, Mikaela Rapp, Nadja M. Meindl-Beinker, Wietske Lambert, Mirjam Lerch, Daniel O. Daley, Klaas-Jan Van Wijk, Judy Hirst, Edmun

Journal:

Protein Science

Year:

2005

Language:

english

File:

PDF, 387 KB

english, 2005

17

Immobilization of the first dimension in 2D blue native/SDS–PAGE allows the relative quantification of membrane proteomes

Mirjam Klepsch, Susan Schlegel, David Wickström, Giulia Friso, Klaas J. van Wijk, Jan-Olov Persson, Jan-Willem de Gier, Samuel Wagner

Journal:

Year:

2008

Language:

english

File:

PDF, 383 KB

english, 2008

18

A Zinc Finger Motif-Containing Protein Is Essential for Chloroplast RNA Editing

Sun, Tao, Shi, Xiaowen, Friso, Giulia, Van Wijk, Klaas, Bentolila, Stephane, Hanson, Maureen R., Copenhaver, Gregory P.

Journal:

Year:

2015

Language:

english

File:

PDF, 3.14 MB

english, 2015

19

APO1 Promotes the Splicing of Chloroplast Group II Introns and Harbors a Plant-Specific Zinc-Dependent RNA Binding Domain

Kenneth P. Watkins, Margarita Rojas, Giulia Friso, Klaas J. van Wijk, Jörg Meurer and Alice Barkan

Journal:

Year:

2011

Language:

english

File:

PDF, 2.20 MB

english, 2011

20

Stepwise Deamidation of Ribonuclease A at Five Sites Determined by Top Down Mass Spectrometry †

Zabrouskov, Vlad, Han, Xuemei, Welker, Ervin, Zhai, Huili, Lin, Cheng, van Wijk, Klaas J., Scheraga, Harold A., McLafferty, Fred W.

Journal:

Year:

2006

Language:

english

File:

PDF, 126 KB

english, 2006

21

In-Depth Analysis of the Thylakoid Membrane Proteome of Arabidopsis thaliana Chloroplasts: New Proteins, New Functions, and a Plastid Proteome Database

Giulia Friso, Lisa Giacomelli, A. Jimmy Ytterberg, Jean-Benoit Peltier, Andrea Rudella, Qi Sun and Klaas J. van Wijk

Journal:

Year:

2004

Language:

english

File:

PDF, 3.87 MB

english, 2004

22

Plastid proteomics

Klaas J. van Wijk

Journal:

Plant Physiology and Biochemistry

Year:

2004

Language:

english

File:

PDF, 676 KB

english, 2004

23

The chloroplast ClpP complex in Chlamydomonas reinhardtii contains an unusual high molecular mass subunit with a large apical domain

Wojciech Majeran, Giulia Friso, Klaas Jan van Wijk, Olivier Vallon

Journal:

Year:

2005

Language:

english

File:

PDF, 597 KB

english, 2005

24

Salicylic Acid Inhibits the Replication of Tomato bushy stunt virus by Directly Targeting a Host Component in the Replication Complex

Tian, Miaoying, Sasvari, Zsuzsanna, Gonzalez, Paulina Alatriste, Friso, Giulia, Rowland, Elden, Liu, Xiao-Min, van Wijk, Klaas J., Nagy, Peter D., Klessig, Daniel F.

Journal:

Molecular Plant-Microbe Interactions

Year:

2015

Language:

english

File:

PDF, 1.63 MB

english, 2015

25

Reactive Oxygen Species || High Light Response of the Thylakoid Proteome in Arabidopsis Wild Type and the Ascorbate-Deficient Mutant vtc2-2. A Comparative Proteomics Study

Lisa Giacomelli, Andrea Rudella and Klaas Jan van Wijk

Journal:

PLANT PHYSIOLOGY

Year:

2006

Language:

english

File:

PDF, 3.38 MB

english, 2006

26

Recent advances in the study of Clp, FtsH and other proteases located in chloroplasts

Zach Adam, Andrea Rudella, Klaas J van Wijk

Journal:

Current Opinion in Plant Biology

Year:

2006

Language:

english

File:

PDF, 217 KB

english, 2006

27

Arabidopsis thalianadeficient in two chloroplast ascorbate peroxidases shows accelerated light-induced necrosis when levels of cellular ascorbate are low

Lisa Giacomelli, Antonio Masi, Daniel R. Ripoll, Mi Ja Lee, Klaas J. van Wijk

Journal:

Plant Molecular Biology

Year:

2007

Language:

english

File:

PDF, 791 KB

english, 2007

28

Studies on the Posttranscriptional Site of cAMP Action in the Regulation of the Synthesis of Tyrosine Aminotransferase

Gerry T. SNOEK, Klaas W. VAN DE POLL, Harry O. VOORMA, Roel VAN WIJK

Journal:

Year:

1981

Language:

english

File:

PDF, 539 KB

english, 1981

29

MET1 Is a Thylakoid-Associated TPR Protein Involved in Photosystem II Supercomplex Formation and Repair in Arabidopsis

Bhuiyan, Nazmul H., Friso, Giulia, Poliakov, Anton, Ponnala, Lalit, van Wijk, Klaas J.

Journal:

Year:

2015

Language:

english

File:

PDF, 2.45 MB

english, 2015

30

Affinity purification of the tobacco plastid RNA polymerase and in vitro reconstitution of the holoenzyme

Jon Y. Suzuki, A. Jimmy Ytterberg, Thomas A. Beardslee, Lori A. Allison, Klaas Jan van Wijk, Pal Maliga

Journal:

The Plant Journal

Year:

2004

Language:

english

File:

PDF, 288 KB

english, 2004

31

The Pathogen-Inducible Nitric Oxide Synthase (iNOS) in Plants Is a Variant of the P Protein of the Glycine Decarboxylase Complex

Meena R. Chandok, A.Jimmy Ytterberg, Klaas J. van Wijk, Daniel F. Klessig

Journal:

Year:

2003

Language:

english

File:

PDF, 626 KB

english, 2003

32

Characterization of the Consequences of YidC Depletion on the Inner Membrane Proteome of E. coli Using 2D Blue Native/SDS-PAGE

David Wickström, Samuel Wagner, Per Simonsson, Ovidiu Pop, Louise Baars, A. Jimmy Ytterberg, Klaas J. van Wijk, Joen Luirink, Jan-Willem L. de Gier

Journal:

Journal of Molecular Biology

Year:

2011

Language:

english

File:

PDF, 530 KB

english, 2011

33

Synthesis and Assembly of the D1 Protein into Photosystem II: Processing of the C-Terminus and Identification of the Initial Assembly Partners and Complexes during Photosystem II Repair †

van Wijk, Klaas J., Roobol-Boza, Margrit, Kettunen, Reetta, Andersson, Bertil, Aro, Eva-Mari

Journal:

Year:

1997

Language:

english

File:

PDF, 298 KB

english, 1997

34

The Clp protease system is required for copper ion-dependent turnover of the PAA2/HMA8 copper transporter in chloroplasts

Tapken, Wiebke, Kim, Jitae, Nishimura, Kenji, van Wijk, Klaas J., Pilon, Marinus

Journal:

New Phytologist

Year:

2015

Language:

english

File:

PDF, 563 KB

english, 2015

35

Subunits of the Plastid CIpPR Protease Complex Have Differential Contributions to Embryogenesis, Plastid Biogenesis, and Plant Development in Arabidopsis

Jitae Kim, Andrea Rudella, Verenice Ramirez Rodriguez, Boris Zybailov, Paul Dominic B. Olinares and Klaas J. van Wijk

Journal:

Year:

2009

Language:

english

File:

PDF, 4.17 MB

english, 2009

36

Auto-catalytic processing and substrate specificity of Arabidopsis chloroplast glutamyl peptidase

Bhuiyan, Nazmul H., Rowland, Elden, Friso, Giulia, Ponnala, Lalit, Michel, Elena JS, van Wijk, Klaas Jan

Journal:

PLANT PHYSIOLOGY

Year:

2020

File:

PDF, 3.52 MB

2020

37

Discovery of a Unique Clp Component, ClpF, in Chloroplasts: A Proposed Binary ClpF-ClpS1 Adaptor Complex Functions in Substrate Recognition and Delivery

Nishimura, Kenji, Apitz, Janina, Friso, Giulia, Kim, Jitae, Ponnala, Lalit, Grimm, Bernhard, van Wijk, Klaas J.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.57 MB

english, 2015

38

Kinetic resolution of different recovery phases of photoinhibited photosystem II in cold-acclimated and non-acclimated spinach leaves

Klaas J. van Wijk, Philip R. van Hasselt

Journal:

Physiologia Plantarum

Year:

1993

Language:

english

File:

PDF, 906 KB

english, 1993

39

Structural and Metabolic Transitions of C₄ Leaf Development and Differentiation Defined by Microscopy and Quantitative Proteomics in Maize

Wojciech Majeran, Giulia Friso, Lalit Ponnala, Brian Connolly, Mingshu Huang, Edwin Reidel, Cankui Zhang, Yukari Asakura, Nazmul H. Bhuiyan, Qi Sun, Robert Turgeon and Klaas J. van Wijk

Journal:

Year:

2010

Language:

english

File:

PDF, 6.81 MB

english, 2010

40

A Ribonuclease III Domain Protein Functions in Group II Intron Splicing in Maize Chloroplasts

Kenneth P. Watkins, Tiffany S. Kroeger, Amy M. Cooke, Rosalind E. Williams-Carrier, Giulia Friso, Susan E. Belcher, Klaas J. van Wijk and Alice Barkan

Journal:

Year:

2007

Language:

english

File:

PDF, 4.94 MB

english, 2007

41

MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data

Hiren J. Joshi, Matthias Hirsch-Hoffmann, Katja Baerenfaller, Wilhelm Gruissem, Sacha Baginsky, Robert Schmidt, Waltraud X. Schulze, Qi Sun, Klaas J. van Wijk, Volker Egelhofer, Stefanie Wienkoop, Wol

Journal:

PLANT PHYSIOLOGY

Year:

2011

Language:

english

File:

PDF, 2.14 MB

english, 2011

42

Chloroplast RH3 DEAD Box RNA Helicases in Maize and Arabidopsis Function in Splicing of Specific Group II Introns and Affect Chloroplast Ribosome Biogenesis

Yukari Asakura, Erin Galarneau, Kenneth P. Watkins, Alice Barkan and Klaas J. van Wijk

Journal:

PLANT PHYSIOLOGY

Year:

2012

Language:

english

File:

PDF, 3.04 MB

english, 2012

43

Subunit Stoichiometry, Evolution, and Functional Implications of an Asymmetric Plant Plastid ClpP/R Protease Complex in Arabidopsis

Paul Dominic B. Olinares, Jitae Kim, Jerrold I. Davis and Klaas J. van Wijk

Journal:

Year:

2011

Language:

english

File:

PDF, 2.67 MB

english, 2011

44

Functions and Substrates of Plastoglobule-Localized Metallopeptidase PGM48

Bhuiyan, Nazmul H., van Wijk, Klaas J.

Journal:

Plant Signaling & Behavior

Year:

2017

Language:

english

File:

PDF, 1.33 MB

english, 2017

45

N‐Degron Specificity of Chloroplast ClpS1 in Plants

Montandon, Cyrille, Dougan, David A., van Wijk, Klaas J.

Journal:

Year:

2019

Language:

english

File:

PDF, 757 KB

english, 2019

46

Plant Proteomics Coming of Age

Komatsu, Setsuko, van Wijk, Klaas J.

Journal:

Journal of Proteome Research

Year:

2012

Language:

english

File:

PDF, 110 KB

english, 2012

47

Animal study on surface-modified defibrillator systems: Indications for enhanced infection resistance

Pauline B. van Wachem, Linda A. Brouwer, Geert Kors, Freark Dijk, Klaas Bel, Jan Elstrodt, Frank van Wijk, Patrick T. Cahalan, Marc Hendriks, Marja J. A. van Luyn

Journal:

Journal of Biomedical Materials Research Part B: Applied Biomaterials

Year:

2001

Language:

english

File:

PDF, 645 KB

english, 2001

48

Time to articulate a vision for the future of plant proteomics – A global perspective: An initiative for establishing the International Plant Proteomics Organization (INPPO)

Ganesh Kumar Agrawal, Dominique Job, Michel Zivy, Vishwanath P. Agrawal, Ralph A. Bradshaw, Michael J. Dunn, Paul A. Haynes, Klaas J. van Wijk, Shoshi Kikuchi, Jenny Renaut, Wolfram Weckwerth, Randeep

Journal:

Year:

2011

Language:

english

File:

PDF, 744 KB

english, 2011

49

A Comprehensive Analysis of the 14-3-3 Interactome in Barley Leaves Using a Complementary Proteomics and Two-Hybrid Approach

Peter J. Schoonheim, Helena Veiga, Daniel da Costa Pereira, Giulia Friso, Klaas J. van Wijk and Albertus H. de Boer

Journal:

PLANT PHYSIOLOGY

Year:

2007

Language:

english

File:

PDF, 2.53 MB

english, 2007

50

Insertion of Leader Peptidase into the Thylakoid Membrane during Synthesis in a Chloroplast Translation System

Edith Houben, Jan-Willem de Gier and Klaas Jan van Wijk

Journal:

Year:

1999

Language:

english

File:

PDF, 2.01 MB

english, 1999

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